BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008E06SP1|AL425875
(795 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1503 1549 0.0
>3x_Contig1503
Length = 10719
Score = 1549 bits (779), Expect = 0.0
Identities = 789/795 (99%)
Strand = Plus / Plus
Query: 1 gtgtccattgcaggtctttcactaggatcaacagtattttgtttcaagaattcttcttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1484 gtgtccattgcaggtctttcactaggatcaacagtattttgtttcaagaattcttcttca 1543
Query: 61 tcctcggataagacgccattgataatatcctgcaatacgtcttgttgagtctttggaggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1544 tcctcggataagacgccattgataatatcctgcaatacgtcttgttgagtctttggaggt 1603
Query: 121 tgtgtgagtbcatcttgtgactgtcctctattgttgccctgttgaaggtctgatgctatt 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1604 tgtgtgagttcatcttgtgactgtcctctattgttgccctgttgaaggtctgatgctatt 1663
Query: 181 accccactactaccaccggctatgtgttcagcataaactgatgatggagccaacgaacca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1664 accccactactaccaccggctatgtgttcagcataaactgatgatggagccaacgaacca 1723
Query: 241 atttctcccatctgagagaaattctgctggctgtaattattgtttggtgccgtaattcta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1724 atttctcccatctgagagaaattctgctggctgtaattattgtttggtgccgtaattcta 1783
Query: 301 ccagaagacaaagccctagaagaggaattcatacttgaattggtaccactttggttaata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1784 ccagaagacaaagccctagaagaggaattcatacttgaattggtaccactttggttaata 1843
Query: 361 gcggagtacggctgcyttggaacagcattatgaagcaaagtggcatcgttattgttactg 420
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1844 gcggagtacggctgctttggaacagcattatgaagcaaagtggcatcgttattgttactg 1903
Query: 421 tgtctttgawaactatttgctgctgccatggttgcyagtccttgcggtggtactacggca 480
||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1904 tgtctttgataactatttgctgctgccatggttgctagtccttgcggtggtactacggca 1963
Query: 481 gtgtttgctgttgttgcagcaacactgccgttgttcatatatgaagagggcacatctgag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1964 gtgtttgctgttgttgcagcaacactgccgttgttcatatatgaagagggcacatctgag 2023
Query: 541 tcagtgaaagtattagagtttaaagtgttgccggtgacgattttcgagcctttataataa 600
||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 2024 tcagtgatagtattagagtttaaagtgttgctggtgacgattttcgagcctttataataa 2083
Query: 601 tccggaatggatggagcatctaaattagtcacctctgtttgattaaactcttctttataa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2084 tccggaatggatggagcatctaaattagtcacctctgtttgattaaactcttctttataa 2143
Query: 661 aatttgtctctgatagacgttgaagaacgatcttcatcttcttcatcgacaagtccgttc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2144 aatttgtctctgatagacgttgaagaacgatcttcatcttcttcatcgacaagtccgttc 2203
Query: 721 ttactattagaagccgtttgagaacgagcaaagaaacataacggcaagcaaaccaaattc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2204 ttactattagaagccgtttgagaacgagcaaagaaacataacggcaagcaaaccaaattc 2263
Query: 781 aacacagcagaagca 795
|||||||||||||||
Sbjct: 2264 aacacagcagaagca 2278
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6264
Number of Sequences: 1807
Number of extensions: 6264
Number of successful extensions: 55
Number of sequences better than 1.0e-20: 1
length of query: 795
length of database: 10,358,551
effective HSP length: 16
effective length of query: 779
effective length of database: 10,329,639
effective search space: 8046788781
effective search space used: 8046788781
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)